Insertion junction: CLIP2.065536_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065536
Chromosome:chromosome 11
Location:1899671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467785 (1 of 3) PTHR10625:SF102 - HISTONE DEACETYLASE 10 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGAGAGATTGCAGGTACTGCAGGCGTGGAGCCGCGTGGGCGGCGGCCG
Internal bar code:ACCTCAGAGTAACAGTCAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2060
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAGTAAAGGCCCCAAGC
Suggested primer 2:CTGGTGCCCGTTTCTCTCTT