Insertion junction: CLIP2.066084_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066084
Chromosome:chromosome 11
Location:1154356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467678 COP6,HKR2 (1 of 5) IPR001660//IPR013761 - Sterile alpha motif domain // Sterile alpha motif/pointed domain; Histidine cyclase rhodopsin 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGCCTTCGATGGGCAGGCCAAGTCTCACGCTGTGACGGCGCATAGC
Internal bar code:AGAGTCTGGAGAATGGGGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2200
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTGAGCCCCTTTCGCTA
Suggested primer 2:CAGTGTGTGACCAAACTGCG