Insertion junction: CLIP2.066084_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066084
Chromosome:chromosome 11
Location:1154356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467678 COP6,HKR2 (1 of 5) IPR001660//IPR013761 - Sterile alpha motif domain // Sterile alpha motif/pointed domain; Histidine cyclase rhodopsin 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCGCACAACAGAACGCTCCACAACCTCTCTCGCTTCTCATCACTTGA
Internal bar code:TGAGCATTCGGGGATACAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3261
LEAP-Seq percent confirming:99.0291
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGTGTGACCAAACTGCG
Suggested primer 2:CCTTTGAGCCCCTTTCGCTA