Insertion junction: CLIP2.066102_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066102
Chromosome:chromosome 3
Location:6458744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193400 (1 of 2) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTCGCAAGCCTGAAGCAGCGAACCCTCTAACGAGCTGAGTACGACCTT
Internal bar code:CTTTGCAGATTTTGGCTCATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2544
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATGGTCCCTCCCGTCTA
Suggested primer 2:GCACCATTCCGTATTTCGCC