Insertion junction: CLIP2.066102_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066102
Chromosome:chromosome 3
Location:6458744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193400 (1 of 2) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGGGATACATACGTTGGGGTGTATTGAATGGGGTTTACTACCGTTT
Internal bar code:CTTTGCAGATTTTGGCTCATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2312
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCATTCCGTATTTCGCC
Suggested primer 2:ACAATGGTCCCTCCCGTCTA