Insertion junction: CLIP2.066177_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066177
Chromosome:chromosome 1
Location:6678765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047600 SDR4 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.121 - Aldose 1-dehydrogenase (NAD(+)) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGCGGTGGTGCTATGGCGAGCTGCGGCTTGGCGTGGAGAAGCTGGG
Internal bar code:TTAGTCGTCAGTAAGAAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:22.8571
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACAGCCTCTTCCGTGG
Suggested primer 2:CGTCAACGTCCAACACACAC