Insertion junction: CLIP2.066243_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066243
Chromosome:chromosome 16
Location:397268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693700 UBC9 Ubiquitin-conjugating enzyme E2; (1 of 2) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTATAGAAGGTTCGTCTAGACTACGTTCAGAGCTTCTCTCTTCTTCA
Internal bar code:TTCTCTAAATTCCATCAGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3751
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTGTTGAGCGGATGACA
Suggested primer 2:CCTTGTGCCTTGGAAAGCAC