Gene: Cre16.g693700
Overview
| Common name: | UBC9 |
| Defline: | Ubiquitin-conjugating enzyme E2; (1 of 2) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) |
| Description: | Ubiquitin-conjugating enzyme E2, subclass VI |
| Synonyms: | Cre16.g693700.t1.1,g15604.t1,UBC9 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g693700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g693700-Venus-3xFLAG
Imaged strain: CSI_LW10E5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
mitochondria
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.061459_1 | CLIP2.061459 | 5'UTR | 80 | 6.1 |
| CLIP2.061459_2 | CLIP2.061459 | 5'UTR | 80 | 6.1 |
| CLIP2.065769_1 | CLIP2.065769 | 5'UTR | 80 | 6.1 |
| CLIP2.065769_2 | CLIP2.065769 | 5'UTR | 80 | 6.1 |
| CLIP2.066243_1 | CLIP2.066243 | 5'UTR | 80 | 6.1 |
| CLIP2.066243_2 | CLIP2.066243 | 5'UTR | 80 | 6.1 |
| CLIP2.067950_1 | CLIP2.067950 | 5'UTR | 80 | 6.1 |
| CLIP2.067950_2 | CLIP2.067950 | 5'UTR | 80 | 6.1 |
| CLIP2.075804_1 | CLIP2.075804 | 5'UTR | 80 | 6.1 |
| CLIP2.075804_2 | CLIP2.075804 | 5'UTR | 80 | 6.1 |
| CLIP2.075928_2 | CLIP2.075928 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.090360_1 | LMJ.RY0402.090360 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.090360_2 | LMJ.RY0402.090360 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.139468_1 | LMJ.RY0402.139468 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.166771_4 | LMJ.RY0402.166771 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00179 |
| PANTHER: | PTHR24068 |
| KEGG_ec: | EC:6.3.2.19 |
| KEGG_orthology: | K06689 |
| KOG: | KOG0417 |
| Gene ontology terms:: | GO:0016881 |
| Best arabidopsis TAIR name: | AT5G53300 |
| Best arabidopsis TAIR symbol: | UBC28 |
| Best arabidopsis TAIR defline: | ubiquitin-conjugating enzyme 10 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.