Insertion junction: CLIP2.075928_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075928
Chromosome:chromosome 16
Location:397302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693700 UBC9 Ubiquitin-conjugating enzyme E2; (1 of 2) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGGTTTTAAGTCCTTGCAAACGTAGAAGCTTTGGTATAGAAGGTTC
Internal bar code:TTCGTAGTTTGGTTTTTATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3860
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTGTTGAGCGGATGACA
Suggested primer 2:GGGGTTCGACATCACCTTGT