Insertion junction: CLIP2.066319_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066319
Chromosome:chromosome 13
Location:625198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565850 COPA1 Alpha subunit of COP-I complex; (1 of 1) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAATGTGTAACTGAATGAAAGCGTGAACGCTCTACGGCAACCCAGCGC
Internal bar code:TTTCGGTTGTTAAAGCCCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3224
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCGGAAACTGTGCCTAG
Suggested primer 2:CACGTGTACGGACCAAGTCA