Insertion junction: CLIP2.066420_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066420
Chromosome:chromosome 12
Location:4881716
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g523850 MPPB,QCR1 (1 of 1) K17732 - mitochondrial-processing peptidase subunit beta [EC:3.4.24.64] (PMPCB, MAS1); Ubiquinol:cytochrome c oxidoreductase 50 kDa core 1 subunit 3'UTR
Cre12.g801416 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACTGATGGTCCCGGCCCTGTCGTCCCGCGCCGTGCAGCTCAAGTCG
Internal bar code:AGATGATGTAACTATCCTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1837
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGATGGGTGTGGTACGG
Suggested primer 2:AAGGGCGAGGTAGGAGATGT