Insertion junction: CLIP2.066550_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066550
Chromosome:chromosome 12
Location:6313643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536800 CGL52 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGATAGATAGTTCAGGATGATGTTGGCTAAGCAAGCCCCCTGCACTCG
Internal bar code:GAGGCTCTTACAGACACGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCTTTCTCCCTAGGCGT
Suggested primer 2:TTCATTCTGCTGCTCCTCCG