Insertion junction: CLIP2.066756_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066756
Chromosome:chromosome 16
Location:1499165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652950 (1 of 1) K11274 - chromosome transmission fidelity protein 4 (WDHD1, CTF4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATGACCTTGCGTCGAGAGCCCCCGCCTCTAGTGAAGGGGAAGAAGAA
Internal bar code:TTGATATGATGTATTACTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3333
LEAP-Seq percent confirming:95.5224
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCTTCCAACGTTGAAAG
Suggested primer 2:ACTGCCAAAGGACGCATGTA