Insertion junction: CLIP2.066988_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066988
Chromosome:chromosome 3
Location:4637251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176930 (1 of 4) PF03134 - TB2/DP1, HVA22 family (TB2_DP1_HVA22) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGTCATGTGTTTGTAACAACATAGGCAACTGCTGCACAGAACGCCT
Internal bar code:TTCCCAGCAAGTTCAGCTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:713
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAGCGCATGCAAGCTAG
Suggested primer 2:GGTGCCCGCATGATCTATGA