Insertion junction: CLIP2.066988_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066988
Chromosome:chromosome 3
Location:4637251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176930 (1 of 4) PF03134 - TB2/DP1, HVA22 family (TB2_DP1_HVA22) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCATCAACCCTCCAAACCCGACCCAACAATAGGCCTCCGAACAGAGC
Internal bar code:TTCCCAGCAAGTTCAGCTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:80.6452
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCCGCATGATCTATGA
Suggested primer 2:CAGAAGCGCATGCAAGCTAG