Insertion junction: CLIP2.067211_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067211
Chromosome:chromosome 3
Location:1456673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151250 LANC1,LAN1 (1 of 1) PF05147 - Lanthionine synthetase C-like protein (LANC_like); LanC lantibiotic synthetase component C-like protein 3'UTR
Cre03.g151300 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCTCCCCTCAACATTCGAGCAGTCAATCACACAGAGCCACAGGCACG
Internal bar code:CGCGGAAGCTGGGTGCAGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTCCCATTCCCATGCCT
Suggested primer 2:TTCTTTCTTCGACAGGGGGC