Insertion junction: CLIP2.067312_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067312
Chromosome:chromosome 3
Location:2349073
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g158250 SCY2,SECY2 (1 of 1) PTHR10906:SF2 - PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC; Preprotein translocase secY subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACCACCCACCGCGTACACCGCGAACCCCAGCGCCAGTGTGTGCGAGG
Internal bar code:CTAGATCGAATCACATGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACTGAAACGGAGGAGGC
Suggested primer 2:CACCTCCCAATCCCACCATC