| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | - |
| Strain: | CLIP2.068164 |
| Chromosome: | chromosome 9 |
| Location: | 3484446 |
| Confidence (%): | 40 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre09.g396139 | (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) | 3'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | GATATCACTGCTCATTGCAACACCTTGTCCCAGCCACCCAGCCGACCTGA |
| Internal bar code: | TCCTTTAATTAAGTCAAACATT |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 354 |
| LEAP-Seq percent confirming: | 81.25 |
| LEAP-Seq n confirming: | 13 |
| LEAP-Seq n nonconfirming: | 3 |
| LEAP-Seq n unique pos: | 16 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | CTGAGCCCGTTCTGGAGATC |
| Suggested primer 2: | GATTAGGGGCTACCGAACCG |