Insertion junction: CLIP2.068176_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068176
Chromosome:chromosome 12
Location:9321580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542050 3'UTR
Cre12.g542100 (1 of 2) 3.4.21.26 - Prolyl oligopeptidase / Prolyl endopeptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACACGCTGCTCTCTCACGCTGCTACTGGACCCGAGGCCGGGAGGCCG
Internal bar code:TGAATACTGTTCGTTTTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2838
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCACTTTACAACAACGT
Suggested primer 2:CCAAGTGCATGAACGCCAAA