Insertion junction: CLIP2.068267_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068267
Chromosome:chromosome 3
Location:4504632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175850 EEP1 (1 of 1) K10771 - AP endonuclease 1 (APEX1); putative exodeoxyribonuclease III 3'UTR
Cre03.g175851 (1 of 13) IPR001487 - Bromodomain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGCAACTCGAATTAGTAATATATGTTGTTTGAGAAGGTCGTCACGC
Internal bar code:CGGCATCTGCGAACGTTCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3367
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATTTCACCAGGCGATTC
Suggested primer 2:TCAACTGCCGGGAGAAGAAC