Insertion junction: CLIP2.068651_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068651
Chromosome:chromosome 13
Location:4873905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605150 MSD2 Mn superoxide dismutase; (1 of 1) PTHR11404//PTHR11404:SF6 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL 3'UTR
Cre13.g605200 MMP29 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGAAACGGAAAGGTCATGGCACAGAGCTACAGGCACCCAGGTAGCTT
Internal bar code:CGCCGGCACGTCGAAGCCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4019
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGTCAACTGGCAGAACGT
Suggested primer 2:CCGCATGTTTGACACCAAGG