Insertion junction: CLIP2.069170_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069170
Chromosome:chromosome 3
Location:4125013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172650 BLD2,TUE1 (1 of 1) K10391 - tubulin epsilon (TUBE); Epsilon tubulin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTGACAGGAACTCCTTTATGTTCCTTTGTGACCCGCAGGGTCTGCC
Internal bar code:TGGGACTCTCGGTGAACTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1510
LEAP-Seq percent confirming:92.7273
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACACCGTGCCATGAGT
Suggested primer 2:TTTCGTGTGAGGCTCCTTCC