Insertion junction: CLIP2.069170_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069170
Chromosome:chromosome 3
Location:4125018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172650 BLD2,TUE1 (1 of 1) K10391 - tubulin epsilon (TUBE); Epsilon tubulin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGAAAGAACAGGTTAGCTACGTGTACCAGCTCTGAGCCGTTGGATAA
Internal bar code:TGGGACTCTCGGTGAACTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1339
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGTGTGAGGCTCCTTCC
Suggested primer 2:CAGTACACCGTGCCATGAGT