Insertion junction: CLIP2.069404_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069404
Chromosome:chromosome 13
Location:4873823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605150 MSD2 Mn superoxide dismutase; (1 of 1) PTHR11404//PTHR11404:SF6 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL 3'UTR
Cre13.g605200 MMP29 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCAGTGCCTGCTTGCCGTGCCACCATCTAAGCTACCTGGGTGCCTG
Internal bar code:GATAGATATACGTATCATAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1412
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCATGTTTGACACCAAGG
Suggested primer 2:ATCGTCAACTGGCAGAACGT