Insertion junction: CLIP2.069780_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069780
Chromosome:plastome
Location:67673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802292 ccsA,ChreCp028,2717027,ycf5 (1 of 1) PTHR30071//PTHR30071:SF8 - HEME EXPORTER PROTEIN C // CYTOCHROME C BIOGENESIS PROTEIN CCSA; cytochrome c biogenesis protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTCTCACAATTTTAATAAACTAGTTTCTTATAATCTATTTTATAAA
Internal bar code:GCTTTAGTTACTTCAATTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:120
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAACACCCAACAGCCCA
Suggested primer 2:CCGTTCTTGTGCGAACAAGG