Insertion junction: CLIP2.069848_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069848
Chromosome:chromosome 6
Location:1621077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261700 (1 of 1) K14815 - mRNA turnover protein 4 (MRT4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACGGGTGTGGCGGCGGACCGAGTAGTCGTGGTGCAGTAGCTAGAGC
Internal bar code:GATTTGATCAGTCAGGCACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TATATGCTTCGCGCTGACGT
Suggested primer 2:TTCCCACCTCTCCTACTCCG