Insertion junction: CLIP2.069935_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069935
Chromosome:chromosome 13
Location:625430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565850 COPA1 Alpha subunit of COP-I complex; (1 of 1) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGTCTGCTGATCATCAGGAGAAGCCCCTATTGCTTGGCGCCGCTGG
Internal bar code:GGGTCTTGGGAACGTCGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5631
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGTACGGACCAAGTCA
Suggested primer 2:GTCTTGCGATGCTGCTTACG