Insertion junction: CLIP2.070471_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070471
Chromosome:chromosome 9
Location:5925328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412000 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 3'UTR
Cre09.g412050 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCAAAGGCAGGGCAGTTCTCGCGATGCAGCTTTTCTGTACTATCATTT
Internal bar code:TTTGTAGGCCGTTATAAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGACACACAGCTTTGGC
Suggested primer 2:CGTTAGGATTCGGGCTACCC