Insertion junction: CLIP2.070480_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070480
Chromosome:chromosome 11
Location:4192172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481500 HIS7 Imidazole glycerol phosphate synthase; (1 of 1) K01663 - glutamine amidotransferase / cyclase (HIS7) 5'UTR_intron
Cre11.g481550 (1 of 1) K03136 - transcription initiation factor TFIIE subunit alpha (TFIIE1, GTF2E1, TFA1, tfe) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAAGGCAATTGGAAAGCTTGAAGGCGTAAACCAGCTGGCCCAGCGTGA
Internal bar code:TTAGGAGGTAGGTTGAGAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:491
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCACATCGCGGATCGTGTAG
Suggested primer 2:CTCCCTTCCCTAGTCCCCTC