Insertion junction: CLIP2.070495_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070495
Chromosome:chromosome 10
Location:1646152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429450 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTTTGGCACGGCGGTGTAAGCATCCGTGCAAGTGAAGCAAGTAAGCG
Internal bar code:GATTCTCAAGGTAGTGGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCATTACTGGGCCACCT
Suggested primer 2:ACATCGACCAACACTCCACC