Insertion junction: CLIP2.070817_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070817
Chromosome:chromosome 12
Location:7670667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555200 (1 of 1) PF09786 - Cytochrome B561, N terminal (CytochromB561_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGCGGGGGACGGCTGCAGGTTGGAAGACGAGTTCCAGGCGGGGCCA
Internal bar code:TTCAGGACTGAGTTGTATGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1010
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCAGATTCAGGGACGGG
Suggested primer 2:GGAGGCAACGGAAGATTGGA