Insertion junction: CLIP2.070909_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070909
Chromosome:chromosome 10
Location:602312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421600 TST2 (1 of 1) PTHR11451//PTHR11451:SF32 - TRNA SYNTHETASE-RELATED // THREONYL-TRNA SYNTHETASE / THREONINE--TRNA LIGASE-RELATED; Threonyl-tRNA synthetase 3'UTR
Cre10.g421650 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAATTCTGCGCTCGCGTGTCGCACTGTACGTGTCATTCACGCCCCAGT
Internal bar code:GGCGTTGAGCTTGTACGTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCACGAGCCTACTTTCTT
Suggested primer 2:GCGTGCGATACCTTGACAAC