Insertion junction: CLIP2.071144_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071144
Chromosome:chromosome 2
Location:2703540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093500 SSD1 Sterol sensing 5-transmembrane protein; (1 of 1) PF03176 - MMPL family (MMPL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGTCAGGAGGCAAGAGACTGGGTCGGGGTCGGGTCATGCCGGTAACG
Internal bar code:CGGATAAGGTTCGTTCGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:53.125
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACCGGGCGAACAATGT
Suggested primer 2:TGAGCTTGATGCAGCACTGA