| Common name: | SSD1 |
| Defline: | Sterol sensing 5-transmembrane protein; (1 of 1) PF03176 - MMPL family (MMPL) |
| Description: | Contains a sterol sensing 5-transmembrane domain similar to those in SCAP, Patched, NPC1 and HMGR |
| Synonyms: | Cre02.g093500.t1.1,SSD1,g1765.t1 |
| Chromosome: | chromosome 2 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.012204_1 | CLIP2.012204 | intron | 80 | 6.1 |
| CLIP2.012204_2 | CLIP2.012204 | intron | 80 | 6.1 |
| CLIP2.069220_1 | CLIP2.069220 | 3'UTR | 80 | 6.1 |
| CLIP2.069220_2 | CLIP2.069220 | 3'UTR | 80 | 6.1 |
| CLIP2.071144_1 | CLIP2.071144 | 3'UTR | 80 | 6.1 |
| CLIP2.071144_2 | CLIP2.071144 | 3'UTR | 80 | 6.1 |
| CLIP2.075076_1 | CLIP2.075076 | 3'UTR | 63 | 6.1 |
| LMJ.RY0402.056224_1 | LMJ.RY0402.056224 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.095602_1 | LMJ.RY0402.095602 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.095602_2 | LMJ.RY0402.095602 | 3'UTR|outside_mRNA | 58 | 5.5 |
| LMJ.RY0402.096397_1 | LMJ.RY0402.096397 | CDS | 73 | 5.5 |
| LMJ.RY0402.153558_1 | LMJ.RY0402.153558 | 3'UTR|outside_mRNA | 73 | 5.5 |
| LMJ.RY0402.188813_1 | LMJ.RY0402.188813 | 3'UTR|outside_mRNA | 73 | 5.5 |
| LMJ.RY0402.254897_1 | LMJ.RY0402.254897 | CDS | 73 | 5.5 |
| PFAM: | PF00873, PF03176 |
| PANTHER: | PTHR10796 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG1934 |
| Gene ontology terms:: | GO:0005215, GO:0006810, GO:0016020, GO:0016021 |
| Best arabidopsis TAIR name: | AT4G38350.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Patched family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.