Insertion junction: CLIP2.075076_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075076
Chromosome:chromosome 2
Location:2703086
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g093500 SSD1 Sterol sensing 5-transmembrane protein; (1 of 1) PF03176 - MMPL family (MMPL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACGAAGCCCCCCAAGTCTCACGCCCCTCGTGTCATCCCTGCGCCTGC
Internal bar code:AACAGAATTTGGTGCTTATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTTGATGCAGCACTGA
Suggested primer 2:CAAAACCGGGCGAACAATGT