Insertion junction: CLIP2.071471_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071471
Chromosome:chromosome 11
Location:2527210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095101 (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F 3'UTR
Cre02.g095102 VPS5C (1 of 4) PTHR10555:SF84 - SORTING NEXIN-8; Subunit of Retromer complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCATAATGCAGCGTGCTGTATGGCGGCGTGGGTGGGCCCCTCTTCG
Internal bar code:AATTTTGATAACGGTTACACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:612
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGTGGTAGTGGCAGAG
Suggested primer 2:GGTGAAAGTGAGCCAGTCGA