Insertion junction: CLIP2.071509_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071509
Chromosome:chromosome 12
Location:2152222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509600 CDD2 (1 of 1) K15441 - tRNA-specific adenosine deaminase 2 [EC:3.5.4.-] (TAD2, ADAT2); Cytosine deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGAAACAACAGCGCCACACAGCAAGGAAACAGCACAGCACCCAAGT
Internal bar code:CGGTATTGTCTATAATTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:622
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGTTCGACGGGTGTGG
Suggested primer 2:TGTCGGGATGATTGCGGAAA