Insertion junction: CLIP2.071817_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071817
Chromosome:chromosome 13
Location:625246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565850 COPA1 Alpha subunit of COP-I complex; (1 of 1) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGTCGCTTGTGAGTTCGTACCAATCGTGGGTAGGGGTCTGACAAG
Internal bar code:TGTATTCCTACCTCAATCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5663
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGTACGGACCAAGTCA
Suggested primer 2:TGTGATTGCCCAAAGCTTGC