Insertion junction: CLIP2.071865_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071865
Chromosome:chromosome 9
Location:5777442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411050 protein of unknown function outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCAATCGATTAACAAGTCCGTGGCGCGTGTGCCATCATTGTAGCGCC
Internal bar code:GACCAAGGTTTTTCATCGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1379
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGCAATGGGTGGCATA
Suggested primer 2:TGCAACGCACCAATTCAGTG