Insertion junction: CLIP2.072488_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072488
Chromosome:chromosome 4
Location:680945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217951 LCI33 Low-CO2-inducible protein; (1 of 9) IPR011011//IPR013083 - Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGCGGGGTTGTGATGGGGCCCTGCGTGCCTCCTTCTTCTTCTCATTG
Internal bar code:CGTGCCATAGCTTCCACGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1465
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGACCAAGCTCAGAAGG
Suggested primer 2:AGCTGTGTCTCTGCACTGAC