Insertion junction: CLIP2.072584_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072584
Chromosome:chromosome 12
Location:3151381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500550 (1 of 2) PTHR10579 - CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAAGGTTATGAACCTACACAAAGTGTTTGCAACGGCGCAACGCGGCG
Internal bar code:TCAAGTGGAAGGTCATGCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATCGCACCCGTAATGTT
Suggested primer 2:TCCTCGGAATGGGACCTGAT