Insertion junction: CLIP2.072692_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072692
Chromosome:chromosome 16
Location:1173808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650450 FAP219 Flagellar Associated Protein 219 5'UTR
Cre16.g650500 (1 of 1) K06195 - ApaG protein (apaG) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTCAAAACGGCACACGCGTGGCTTCGAAGGCAAAATGATGCGCAGGT
Internal bar code:TGGCTTGCGGTGGTGTTGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1057
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTCCACGTTTGGTAT
Suggested primer 2:GGTTAAGAGGGGAAACGGGG