Insertion junction: CLIP2.072729_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072729
Chromosome:chromosome 10
Location:5341429
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g456851 TMG4 tRNA (guanine-N1)-methyltransferase; (1 of 3) 2.1.1.221 - tRNA (guanine(9)-N(1))-methyltransferase / tRNA m(1)G(9)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGGAGGCATCGTGGACAAGTCCGTCATACGCGGCGTCACGGCCGGC
Internal bar code:CCATCGTTACTTAAGGGGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGTGTGCGCATGAACC
Suggested primer 2:TGTGTGTCATGGTCACGAGG