Insertion junction: CLIP2.073333_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073333
Chromosome:chromosome 6
Location:1556652
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g261026 (1 of 1) IPR001478//IPR014756 - PDZ domain // Immunoglobulin E-set intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTTCCCTCCCTACTTCCCGTTCGCCGCGTGTGCCCACCTCTCACCCT
Internal bar code:GTAAGGAGTATCTGATGTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTTAGTTGGGCGTGTG
Suggested primer 2:TGGTGCAGGACATCAAGGTC