Insertion junction: CLIP2.073565_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073565
Chromosome:chromosome 12
Location:9719053
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g554528 PPR10 PentatricoPeptide Repeat protein 10; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAGTGGCGGTGGTGGTGGGGGCGGGGGCAGCTGGTGCCGCCGCAGTG
Internal bar code:ACGTGTGAAGTATAGGAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCCTGCCAATCCATTGT
Suggested primer 2:GCGGAGATGGGTCTTTGGAA