Insertion junction: CLIP2.073759_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073759
Chromosome:chromosome 12
Location:4882900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523950 (1 of 1) PTHR21229//PTHR21229:SF2 - LUNG SEVEN TRANSMEMBRANE RECEPTOR // PROTEIN C15H9.5 3'UTR
Cre12.g801416 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCTTCTGTAACCTACCGCCGCGAGCTGGCCCGCCCCACCACCAGCCC
Internal bar code:TGTTTTTGGCAATTGCCACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1765
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCTCCTACCTCGCCCTT
Suggested primer 2:CTGCTCAGCGCTTTTTGTGT