Insertion junction: CLIP2.073820_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073820
Chromosome:chromosome 9
Location:2981074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393358 VIG1 Vasa-intronic gene homolog; (1 of 1) K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATCCCTTGTTCCTCACTGTCTCATTAACAAGTTGGCTTGGTCTTAAC
Internal bar code:TAGTCAGTAAAGCTTGGACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1477
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGTAGTAGACATCGCG
Suggested primer 2:AATCACGATACCCGACGGTG