Insertion junction: CLIP2.074063_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074063
Chromosome:chromosome 2
Location:6807566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388097 TOC80,OEP80 Putative outer membrane chloroplast protein; (1 of 2) K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGCAATCGAGGGCTGGCGCGGACCTGGAAACAGCAGCACCAAATGC
Internal bar code:ATTATGAGATAATCTTGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCCGACACGTTCAAAC
Suggested primer 2:ATCGTAACGCCAGCAGTGAA