Insertion junction: CLIP2.074195_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074195
Chromosome:chromosome 1
Location:2653215
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g016050 PRP8 (1 of 1) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8); Splicing factor, component of the U5 snRNP and of the spliceosome intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCTATCAACCCGCACCAGCACAGACATCTCCCCTGCACCTCCATGC
Internal bar code:TAGTCTTTGAGGATTTCGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAACCCTACACGCTCCT
Suggested primer 2:TGTTGTTGGGTTCCAGCAGT