Insertion junction: CLIP2.074236_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074236
Chromosome:chromosome 1
Location:4084620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027100 IMP2 Mitochondrial inner membrane signal peptidase; (1 of 1) K09648 - mitochondrial inner membrane protease subunit 2 (IMP2) 3'UTR
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTCCAAAGTGAACGGGACCTTTCCATGCGCCACGCCGAAATCACACC
Internal bar code:GAATGGCACCTTGATAGCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4058
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCGTTCCAACCTGCATG
Suggested primer 2:GAGTGGAGGGGGTTTGATGG